fixed datalist names and added change to working directory

AUVAbyssWorkflow_singlesurvey.ipynb

@@ -166,6 +166,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
+    "%cd $rootpath\n",
     "!mbpreprocess --input=$datalistraw"
    ]
   },
@@ -194,7 +195,7 @@
    "source": [
     "%cd $rootpath\n",
     "# Set lever arm offset\n",
-    "!mbset -I$datalistraw -PSONAROFFSETX:-0.079 -PSONAROFFSETY:0.196 -PSONAROFFSETZ:0.048 -PVRUOFFSETX:-0.4473 -PVRUOFFSETY:0.000 -PVRUOFFSETZ:-0.3395"
+    "!mbset -I$datalist -PSONAROFFSETX:-0.079 -PSONAROFFSETY:0.196 -PSONAROFFSETZ:0.048 -PVRUOFFSETX:-0.4473 -PVRUOFFSETY:0.000 -PVRUOFFSETZ:-0.3395"
    ]
   },
   {
@@ -207,7 +208,7 @@
    "source": [
     "%cd $rootpath\n",
     "# Set bias\n",
-    "!mbset -I$datalistraw -PROLLBIAS:0.17 -PPITCHBIAS:1.32 -PHEADINGOFFSET:0.93"
+    "!mbset -I$datalist -PROLLBIAS:0.17 -PPITCHBIAS:1.32 -PHEADINGOFFSET:0.93"
    ]
   },
   {
@@ -220,7 +221,7 @@
    "source": [
     "%cd $rootpath\n",
     "# apply offsets and biases\n",
-    "!mbprocess -I$datalistraw -V"
+    "!mbprocess -I$datalist -V"
    ]
   },
   {
@@ -711,21 +712,21 @@
  "metadata": {
   "anaconda-cloud": {},
   "kernelspec": {
-   "display_name": "Python 3",
+   "display_name": "Python 2",
    "language": "python",
-   "name": "python3"
+   "name": "python2"
   },
   "language_info": {
    "codemirror_mode": {
     "name": "ipython",
-    "version": 3
+    "version": 2
    },
    "file_extension": ".py",
    "mimetype": "text/x-python",
    "name": "python",
    "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython3",
-   "version": "3.6.1"
+   "pygments_lexer": "ipython2",
+   "version": "2.7.12"
   }
  },
  "nbformat": 4,