2 Workflow

2.1 Info

In the following, I give an overview over the individual steps done in during de novo assembly of the barred hamlet (Hypoplectrus puella) genome.

 Kosmas Hench committed Jun 15, 2018 255 256 257 

Within the scheme, each arrow represents a script (or class of scripts) connecting individual steps of the assembly/ analysis.

The respective scripts are store in the folders $WORK/1_assembly_scripts &$WORK/2_reSeq-scripts.

For the final visualization (the green squares in panel 2.2.Popgen), additional documentation is provided in the following pages.

 k-hench committed May 29, 2018 258 
 Kosmas Hench committed Jul 12, 2018 259   k-hench committed May 29, 2018 260 261 262 263 264 265 266 267 268 269