Commit 49156497 authored by Kosmas Hench's avatar Kosmas Hench

update 2.2.8.1 LD scripts

parent c65d7278
......@@ -15,4 +15,4 @@ vcftools --gzvcf $WORK/2_output/07_phased_variants/6_phased_mac2.vcf.gz \
--interchrom-hap-r2 \
--out spotlight.XXnameXX
gzip XXnameXX.interchrom.hap.ld
gzip spotlight.XXnameXX.interchrom.hap.ld
......@@ -14,4 +14,4 @@ vcftools --gzvcf $WORK/2_output/07_phased_variants/6_phased_mac2.vcf.gz \
--interchrom-hap-r2 \
--out spotlight.global
gzip global.interchrom.hap.ld
gzip spotlight.global.interchrom.hap.ld
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