Commit ab962a6c authored by Kosmas Hench's avatar Kosmas Hench
Browse files

omit set_reduce_2xs.gz

parent aa182a42

.gitignore

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@@ -2,6 +2,7 @@ 
.Rhistory

.RData

.Ruserdata

0_data/0_resources/set_reduce_2xs.gz

1-output

2_output/08_popGen/*

2_output/07_phased_variants/*

1_assembly_scripts/1-1_assambly_prep/1.1.2.0.subset.sh

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@@ -12,5 +12,6 @@ gunzip set_reduce_2xs.gz 


cd $WORK/1-output/01_PB_prep



# the file set_reduce_2xs is too large for the github repository, if neded please contat the authors

seqtk subseq ../04_libs_clean/04_clean_lib_2x.1.fq $WORK/0_data/0_resources/set_reduce_2xs > 66pct_2x.1.fq

seqtk subseq ../04_libs_clean/04_clean_lib_2x.2.fq $WORK/0_data/0_resources/set_reduce_2xs > 66pct_2x.2.fq