Commit ab962a6c authored by Kosmas Hench's avatar Kosmas Hench

omit set_reduce_2xs.gz

parent aa182a42
......@@ -2,8 +2,9 @@
.Rhistory
.RData
.Ruserdata
0_data/0_resources/set_reduce_2xs.gz
1-output
2_output/08_popGen/*
2_output/07_phased_variants/*
!2_output/08_popGen/00_synteny
2_output/09_expression/*
\ No newline at end of file
2_output/09_expression/*
......@@ -12,5 +12,6 @@ gunzip set_reduce_2xs.gz
cd $WORK/1-output/01_PB_prep
# the file set_reduce_2xs is too large for the github repository, if neded please contat the authors
seqtk subseq ../04_libs_clean/04_clean_lib_2x.1.fq $WORK/0_data/0_resources/set_reduce_2xs > 66pct_2x.1.fq
seqtk subseq ../04_libs_clean/04_clean_lib_2x.2.fq $WORK/0_data/0_resources/set_reduce_2xs > 66pct_2x.2.fq
seqtk subseq ../04_libs_clean/04_clean_lib_2x.2.fq $WORK/0_data/0_resources/set_reduce_2xs > 66pct_2x.2.fq
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